Name: | Negative Binomial Dynamical System |
---|---|
Abbreviation: | DDS-NBDS |
Owner: | covid19hub |
Team name: | Discrete Dynamical Systems |
Description: | Jointly modeling daily deaths and cases using a negative binomial distribution based nonparametric Bayesian generalized linear dynamical system. |
Contributors: | Rahi Kalantari <rkalantari@utexas.edu>, Mingyuan Zhou <mingyuan.zhou@mccombs.utexas.edu> |
License: | MIT |
Notes: | primary |
Citation: | https://dds-covid19.github.io/ |
Methods: | We introduce negative binomial linear dynamical system (NBDS) to jointly model daily deaths and cases reported at all 50 US States and D.C. NBDS is a nonparametric Bayesian hierarchical model built on the graph gamma process (GGP). Generated from the GGP is an infinite dimensional directed sparse random graph, which is constructed by taking the OR operation of countably infinite binary adjacency matrices that share the same set of countably infinite nodes. Each of these adjacency matrices is associated with a weight to indicate its overall activation strength, and places a finite number of edges between a finite subset of nodes belonging to the same community. We use the generated random graph, whose number of nonzero-degree nodes is finite, to define both the sparsity patterns and dimensions of the latent state transition matrices of generalized linear dynamical systems. We show how the formed overlapping communities in the latent space can provide interpretable latent transition patterns of the COVID-19 time series, providing good predictive performance and uncertainty estimation. |
Home: | https://dds-covid19.github.io/ |
Auxiliary data: | https://github.com/dds-covid19/dds-covid19.github.io |
Timezero | Data Source | Upload Time | Issue date | Version |
---|---|---|---|---|
2021-04-08 | (No data) | |||
2021-04-05 | 2021-04-05-DDS-NBDS.csv | 2021-04-06 00:27:25 UTC | 2021-04-05 | |
2021-04-04 | (No data) | |||
2021-04-03 | (No data) | |||
2021-04-02 | (No data) | |||
2021-04-01 | (No data) | |||
2021-03-31 | (No data) | |||
2021-03-30 | (No data) | |||
2021-03-29 | 2021-03-29-DDS-NBDS.csv | 2021-03-30 01:09:52 UTC | 2021-03-29 | |
2021-03-28 | (No data) | |||
2021-03-26 | (No data) | |||
2021-03-27 | (No data) | |||
2021-03-25 | (No data) | |||
2021-03-24 | (No data) | |||
2021-03-22 | 2021-03-22-DDS-NBDS.csv | 2021-03-23 01:20:08 UTC | 2021-03-22 | |
2021-03-18 | (No data) | |||
2021-03-17 | (No data) | |||
2021-03-19 | (No data) | |||
2021-03-20 | (No data) | |||
2021-03-21 | (No data) | |||
2021-03-15 | 2021-03-15-DDS-NBDS.csv | 2021-03-16 01:58:29 UTC | 2021-03-15 | 1 of 2 |
2021-03-15 | 2021-03-15-DDS-NBDS.csv | 2021-03-16 07:39:03 UTC | 2021-03-16 | 2 of 2 |
2021-03-14 | (No data) | |||
2021-03-13 | (No data) | |||
2021-03-12 | (No data) | |||
2021-03-11 | (No data) | |||
2021-03-09 | (No data) | |||
2021-03-10 | (No data) | |||
2021-03-08 | 2021-03-08-DDS-NBDS.csv | 2021-03-09 01:19:35 UTC | 2021-03-08 | |
2021-03-07 | (No data) | |||
2021-03-06 | (No data) | |||
2021-03-05 | (No data) | |||
2021-03-04 | (No data) | |||
2021-03-03 | (No data) | |||
2021-03-02 | (No data) | |||
2021-03-01 | 2021-03-01-DDS-NBDS.csv | 2021-03-02 01:03:40 UTC | 2021-03-01 | |
2021-02-28 | (No data) | |||
2021-02-27 | (No data) | |||
2021-02-24 | (No data) | |||
2021-02-25 | (No data) | |||
2021-02-23 | (No data) | |||
2021-02-22 | 2021-02-22-DDS-NBDS.csv | 2021-02-23 00:55:34 UTC | 2021-02-22 | 1 of 2 |
2021-02-22 | 2021-02-22-DDS-NBDS.csv | 2021-02-23 06:48:03 UTC | 2021-02-23 | 2 of 2 |
2021-02-21 | (No data) | |||
2021-02-20 | (No data) | |||
2021-02-17 | (No data) | |||
2021-02-18 | (No data) | |||
2021-02-16 | (No data) | |||
2021-02-15 | (No data) | |||
2021-02-14 | (No data) | |||
2021-02-13 | (No data) | |||
2021-02-12 | (No data) | |||
2021-02-11 | (No data) | |||
2021-02-08 | 2021-02-08-DDS-NBDS.csv | 2021-02-08 18:33:47 UTC | 2021-02-08 | |
2021-02-07 | (No data) | |||
2021-02-06 | (No data) | |||
2021-02-05 | (No data) | |||
2021-02-04 | (No data) | |||
2021-02-02 | (No data) | |||
2021-02-01 | 2021-02-01-DDS-NBDS.csv | 2021-02-02 06:26:37 UTC | 2021-02-02 | |
2021-01-29 | (No data) | |||
2021-01-31 | (No data) | |||
2021-01-28 | (No data) | |||
2021-01-27 | (No data) | |||
2021-01-25 | 2021-01-25-DDS-NBDS.csv | 2021-01-26 00:48:27 UTC | 2021-01-25 | |
2021-01-24 | (No data) | |||
2021-01-23 | (No data) | |||
2021-01-22 | (No data) | |||
2021-01-21 | (No data) | |||
2021-01-19 | (No data) | |||
2021-01-18 | 2021-01-18-DDS-NBDS.csv | 2021-01-21 18:59:41 UTC | 2021-01-21 | |
2021-01-16 | (No data) | |||
2021-01-15 | (No data) | |||
2021-01-17 | (No data) | |||
2021-01-14 | (No data) | |||
2021-01-13 | (No data) | |||
2021-01-11 | 2021-01-11-DDS-NBDS.csv | 2021-01-12 01:49:32 UTC | 2021-01-11 | |
2021-01-09 | (No data) | |||
2021-01-10 | (No data) | |||
2021-01-06 | (No data) | |||
2021-01-05 | (No data) | |||
2021-01-04 | 2021-01-04-DDS-NBDS.csv | 2021-01-05 01:15:47 UTC | 2021-01-04 | |
2021-01-03 | (No data) | |||
2020-12-30 | (No data) | |||
2020-12-27 | (No data) | |||
2020-12-23 | (No data) | |||
2020-12-24 | (No data) | |||
2020-12-22 | (No data) | |||
2020-12-20 | (No data) | |||
2020-12-19 | (No data) | |||
2020-12-18 | (No data) | |||
2020-12-17 | (No data) | |||
2020-12-16 | (No data) | |||
2020-12-15 | (No data) | |||
2020-12-13 | (No data) | |||
2020-12-11 | (No data) | |||
2020-12-10 | (No data) | |||
2020-12-08 | (No data) | |||
2020-12-05 | (No data) | |||
2020-12-06 | (No data) | |||
2020-12-03 | (No data) | |||
2020-12-01 | (No data) | |||
2020-11-29 | (No data) | |||
2020-11-26 | (No data) | |||
2020-11-24 | (No data) | |||
2020-11-21 | (No data) | |||
2020-11-22 | (No data) | |||
2020-11-19 | (No data) | |||
2020-11-18 | (No data) | |||
2020-11-17 | (No data) | |||
2020-11-15 | (No data) | |||
2020-11-12 | (No data) | |||
2020-11-05 | (No data) | |||
2020-11-08 | (No data) | |||
2020-11-04 | (No data) | |||
2020-11-01 | (No data) | |||
2020-10-29 | (No data) | |||
2020-10-25 | (No data) | |||
2020-10-22 | (No data) | |||
2020-10-18 | (No data) | |||
2020-10-16 | (No data) | |||
2020-10-15 | (No data) | |||
2020-10-11 | 2020-10-11-DDS-NBDS.csv | 2020-10-12 12:48:57 UTC | 2020-10-12 | |
2020-10-08 | (No data) | |||
2020-10-04 | 2020-10-04-DDS-NBDS.csv | 2020-10-05 12:41:16 UTC | 2020-10-05 | |
2020-10-02 | (No data) | |||
2020-10-03 | (No data) | |||
2020-10-01 | (No data) | |||
2020-09-30 | (No data) | |||
2020-09-29 | (No data) | |||
2020-09-25 | (No data) | |||
2020-09-26 | (No data) | |||
2020-09-27 | 2020-09-27-DDS-NBDS.csv | 2020-09-28 06:26:54 UTC | 2020-09-28 | |
2020-09-24 | (No data) | |||
2020-09-23 | (No data) | |||
2020-09-22 | (No data) | |||
2020-09-19 | (No data) | |||
2020-09-20 | 2020-09-20-DDS-NBDS.csv | 2020-09-21 06:25:50 UTC | 2020-09-21 | |
2020-09-18 | (No data) | |||
2020-09-17 | (No data) | |||
2020-09-16 | (No data) | |||
2020-09-15 | (No data) | |||
2020-09-11 | (No data) | |||
2020-09-13 | 2020-09-13-DDS-NBDS.csv | 2020-09-14 15:13:15 UTC | 2020-09-14 | |
2020-09-12 | (No data) | |||
2020-09-10 | (No data) | |||
2020-09-09 | (No data) | |||
2020-09-08 | (No data) | |||
2020-09-06 | (No data) | |||
2020-09-05 | (No data) | |||
2020-09-04 | (No data) | |||
2020-09-03 | (No data) | |||
2020-09-01 | (No data) | |||
2020-09-02 | (No data) | |||
2020-08-28 | (No data) | |||
2020-08-29 | (No data) | |||
2020-08-30 | 2020-08-30-DDS-NBDS.csv | 2020-08-31 06:18:02 UTC | 2020-08-31 | |
2020-08-27 | (No data) | |||
2020-08-26 | (No data) | |||
2020-08-25 | (No data) | |||
2020-08-23 | (No data) | |||
2020-08-22 | (No data) | |||
2020-08-21 | (No data) | |||
2020-08-20 | (No data) | |||
2020-08-19 | (No data) | |||
2020-08-18 | (No data) | |||
2020-08-16 | (No data) | |||
2020-08-15 | (No data) | |||
2020-08-14 | (No data) | |||
2020-08-13 | (No data) | |||
2020-08-12 | (No data) | |||
2020-08-11 | (No data) | |||
2020-08-09 | 2020-08-09-DDS-NBDS.csv | 2020-08-10 06:18:01 UTC | 2020-08-10 | |
2020-08-08 | (No data) | |||
2020-08-07 | (No data) | |||
2020-08-06 | (No data) | |||
2020-08-05 | (No data) | |||
2020-08-04 | (No data) | |||
2020-08-02 | (No data) | |||
2020-07-31 | (No data) | |||
2020-08-01 | (No data) | |||
2020-07-30 | (No data) | |||
2020-07-29 | (No data) | |||
2020-07-28 | (No data) | |||
2020-07-25 | (No data) | |||
2020-07-26 | (No data) | |||
2020-07-24 | (No data) | |||
2020-07-23 | (No data) | |||
2020-07-22 | (No data) | |||
2020-07-21 | (No data) | |||
2020-07-18 | (No data) | |||
2020-07-19 | (No data) | |||
2020-07-17 | (No data) | |||
2020-07-16 | (No data) | |||
2020-07-15 | (No data) | |||
2020-07-14 | (No data) | |||
2020-07-10 | (No data) | |||
2020-07-12 | (No data) | |||
2020-07-11 | (No data) | |||
2020-07-09 | (No data) | |||
2020-07-08 | (No data) | |||
2020-07-07 | (No data) | |||
2020-07-05 | (No data) | |||
2020-07-04 | (No data) | |||
2020-07-03 | (No data) | |||
2020-07-02 | (No data) | |||
2020-07-01 | (No data) | |||
2020-06-30 | (No data) | |||
2020-06-28 | (No data) | |||
2020-06-27 | (No data) | |||
2020-06-26 | (No data) | |||
2020-06-25 | (No data) | |||
2020-06-24 | (No data) | |||
2020-06-23 | (No data) | |||
2020-06-21 | (No data) | |||
2020-06-20 | (No data) | |||
2020-06-19 | (No data) | |||
2020-06-18 | (No data) | |||
2020-06-17 | (No data) | |||
2020-06-16 | (No data) | |||
2020-06-14 | (No data) | |||
2020-06-13 | (No data) | |||
2020-06-12 | (No data) | |||
2020-06-11 | (No data) | |||
2020-06-10 | (No data) | |||
2020-06-09 | (No data) | |||
2020-06-06 | (No data) | |||
2020-06-05 | (No data) | |||
2020-06-07 | (No data) | |||
2020-06-04 | (No data) | |||
2020-06-03 | (No data) | |||
2020-06-02 | (No data) | |||
2020-05-30 | (No data) | |||
2020-05-27 | (No data) | |||
2020-05-26 | (No data) | |||
2020-05-31 | (No data) | |||
2020-05-29 | (No data) | |||
2020-04-14 | (No data) | |||
2020-05-28 | (No data) | |||
2020-05-22 | (No data) | |||
2020-05-19 | (No data) | |||
2020-05-20 | (No data) | |||
2020-05-23 | (No data) | |||
2020-05-24 | (No data) | |||
2020-05-21 | (No data) | |||
2020-05-15 | (No data) | |||
2020-05-16 | (No data) | |||
2020-05-13 | (No data) | |||
2020-05-17 | (No data) | |||
2020-05-12 | (No data) | |||
2020-05-14 | (No data) | |||
2020-05-09 | (No data) | |||
2020-05-10 | (No data) | |||
2020-03-15 | (No data) | |||
2020-05-08 | (No data) | |||
2020-05-07 | (No data) | |||
2019-12-30 | (No data) | |||
2020-03-16 | (No data) | |||
2020-05-06 | (No data) | |||
2020-05-05 | (No data) | |||
2020-01-06 | (No data) | |||
2020-03-09 | (No data) | |||
2020-03-02 | (No data) | |||
2020-02-24 | (No data) | |||
2020-02-17 | (No data) | |||
2020-02-10 | (No data) | |||
2020-02-03 | (No data) | |||
2020-01-27 | (No data) | |||
2020-01-20 | (No data) | |||
2020-01-13 | (No data) | |||
2020-04-09 | (No data) | |||
2020-04-07 | (No data) | |||
2020-04-01 | (No data) | |||
2020-03-31 | (No data) | |||
2020-03-27 | (No data) | |||
2020-04-08 | (No data) | |||
2020-04-05 | (No data) | |||
2020-03-29 | (No data) | |||
2020-03-22 | (No data) | |||
2020-05-03 | (No data) | |||
2020-05-02 | (No data) | |||
2020-05-01 | (No data) | |||
2020-04-30 | (No data) | |||
2020-04-29 | (No data) | |||
2020-04-28 | (No data) | |||
2020-04-25 | (No data) | |||
2020-04-24 | (No data) | |||
2020-04-22 | (No data) | |||
2020-04-21 | (No data) | |||
2020-04-18 | (No data) | |||
2020-04-17 | (No data) | |||
2020-04-15 | (No data) | |||
2020-04-26 | (No data) | |||
2020-04-23 | (No data) | |||
2020-04-19 | (No data) | |||
2020-04-16 | (No data) | |||
2020-04-12 | (No data) | |||
2020-12-28 | 2020-12-28-DDS-NBDS.csv | 2020-12-29 06:57:48 UTC | 2020-12-29 | |
2020-12-21 | 2020-12-21-DDS-NBDS.csv | 2020-12-22 16:33:50 UTC | 2020-12-22 | |
2020-12-14 | 2020-12-14-DDS-NBDS.csv | 2020-12-15 00:31:44 UTC | 2020-12-14 | |
2020-12-07 | 2020-12-07-DDS-NBDS.csv | 2020-12-08 00:31:43 UTC | 2020-12-07 | |
2020-11-30 | 2020-11-30-DDS-NBDS.csv | 2020-12-01 00:27:00 UTC | 2020-11-30 | |
2020-11-23 | 2020-11-23-DDS-NBDS.csv | 2020-11-23 18:17:08 UTC | 2020-11-23 | |
2020-11-16 | 2020-11-16-DDS-NBDS.csv | 2020-11-17 06:44:24 UTC | 2020-11-17 | |
2020-11-09 | 2020-11-09-DDS-NBDS.csv | 2020-11-11 21:43:05 UTC | 2020-11-11 | |
2020-11-02 | 2020-11-02-DDS-NBDS.csv | 2020-11-03 01:08:49 UTC | 2020-11-03 | |
2020-10-26 | 2020-10-26-DDS-NBDS.csv | 2020-10-27 01:38:37 UTC | 2020-10-27 | |
2020-10-19 | 2020-10-19-DDS-NBDS.csv | 2020-10-20 19:06:45 UTC | 2020-10-20 | |
2020-10-12 | 2020-10-12-DDS-NBDS.csv | 2020-10-13 06:30:37 UTC | 2020-10-13 | |
2020-10-05 | 2020-10-05-DDS-NBDS.csv | 2020-10-06 12:48:45 UTC | 2020-10-06 | |
2020-09-28 | 2020-09-28-DDS-NBDS.csv | 2020-09-29 01:12:06 UTC | 2020-09-29 | |
2020-09-21 | 2020-09-21-DDS-NBDS.csv | 2020-09-21 18:27:13 UTC | 2020-09-21 | |
2020-09-14 | 2020-09-14-DDS-NBDS.csv | 2020-09-15 00:57:36 UTC | 2020-09-15 | |
2020-09-07 | 2020-09-07-DDS-NBDS.csv | 2020-09-08 01:03:38 UTC | 2020-09-08 | |
2020-08-31 | 2020-08-31-DDS-NBDS.csv | 2020-09-01 00:57:36 UTC | 2020-09-01 | |
2020-08-24 | 2020-08-24-DDS-NBDS.csv | 2020-08-25 00:50:05 UTC | 2020-08-25 | |
2020-08-17 | 2020-08-17-DDS-NBDS.csv | 2020-08-18 18:38:09 UTC | 2020-08-18 | |
2020-08-10 | 2020-08-10-DDS-NBDS.csv | 2020-08-11 00:50:03 UTC | 2020-08-11 | |
2020-08-03 | 2020-08-03-DDS-NBDS.csv | 2020-08-04 00:55:50 UTC | 2020-08-04 | |
2020-07-27 | 2020-07-27-DDS-NBDS.csv | 2020-07-28 01:24:40 UTC | 2020-07-28 | |
2020-07-20 | (No data) | |||
2020-07-13 | (No data) | |||
2020-07-06 | (No data) | |||
2020-06-29 | (No data) | |||
2020-06-22 | (No data) | |||
2020-06-15 | (No data) | |||
2020-06-08 | (No data) | |||
2020-06-01 | (No data) | |||
2020-05-25 | (No data) | |||
2020-05-18 | (No data) | |||
2020-05-11 | (No data) | |||
2020-05-04 | (No data) | |||
2020-04-27 | (No data) | |||
2020-04-20 | (No data) | |||
2020-04-13 | (No data) | |||
2020-04-06 | (No data) | |||
2020-03-30 | (No data) | |||
2020-03-23 | (No data) |